Category: Publications


Publication: Uniting alignments and trees

Löytynoja, A. & Goldman, N. Evolution. Uniting alignments and trees. Science 324, 1528–1529 (2009). Phylogenetic trees depicting the evolutionary relatedness of different species or groups of species are often determined by analyzing the similarities...


Publication: Phylogeny-aware alignment with PRANK

Löytynoja, A. Phylogeny-aware alignment with PRANK. Methods Mol. Biol. 1079, 155–170 (2014). Evolutionary analyses require sequence alignments that correctly represent evolutionary homology. Evolutionary and structural homology are not the same and sequence alignments generated...