Teaching

Follow:

  • Research topic: Glutton - reference-based assembly of RNA-seq data
    Research topic: Glutton - reference-based assembly of RNA-seq data
  • Research topic: Evolutionary genomics of Saimaa ringed seal
    Research topic: Evolutionary genomics of Saimaa ringed seal
  • Research topic: Canopy -- parallelised, iterative search of optimal phylogeny and phylogeny-aware MSA
    Research topic: Canopy -- parallelised, iterative search of optimal phylogeny and phylogeny-aware MSA
  • Research topic: Séance -- reference-based phylogenetic analysis for 18S rRNA studies
    Research topic: Séance -- reference-based phylogenetic analysis for 18S rRNA studies
  • Research topic: Wasabi -- a web–based platform for evolutionary sequence analysis
    Research topic: Wasabi -- a web–based platform for evolutionary sequence analysis
  • Letter: Simple chained guide trees give poorer multiple sequence alignments than inferred trees in simulation and phylogenetic benchmarks
    Letter: Simple chained guide trees give poorer multiple sequence alignments than inferred trees in simulation and phylogenetic benchmarks
  • Publication: Séance - reference-based phylogenetic analysis for 18S rRNA studies
    Publication: Séance - reference-based phylogenetic analysis for 18S rRNA studies
  • Publication: Accurate extension of multiple sequence alignments using a phylogeny-aware graph algorithm
    Publication: Accurate extension of multiple sequence alignments using a phylogeny-aware graph algorithm
  • Publication: Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
    Publication: Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
  • Publication: webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser
    Publication: webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser
  • Publication: Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis
    Publication: Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis
  • Publication: Alignment Methods: Strategies, Challenges, Benchmarking, and Comparative Overview
    Publication: Alignment Methods: Strategies, Challenges, Benchmarking, and Comparative Overview
  • Publication: A model of evolution and structure for multiple sequence alignment
    Publication: A model of evolution and structure for multiple sequence alignment
  • Publication: An algorithm for progressive multiple alignment of sequences with insertions
    Publication: An algorithm for progressive multiple alignment of sequences with insertions
  • Publication: Uniting alignments and trees
    Publication: Uniting alignments and trees